STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32232.1Transferase hexapeptide repeat containing protein. (65 aa)    
Predicted Functional Partners:
EED32231.1
Hypothetical protein.
       0.798
EED32096.1
Conserved hypothetical protein.
 
     0.796
EED32097.1
Secreted protein.
 
    0.778
EED32094.1
Glycosyl transferase, group 1; [M] COG0438 Glycosyltransferase.
 
    0.777
EED32095.1
Methyltransferase type 11; [QR] COG0500 SAM-dependent methyltransferases.
  
     0.763
EED33978.1
Putative UDP-glucose lipid carrier transferase; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.743
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
 
  0.713
NOR53_220
Cell wall biogenesis protein (WbpE); [E] COG0436 Aspartate/tyrosine/aromatic aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.684
EED31998.1
Aminotransferase; [M] COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.684
cysE
[R] COG0110 Acetyltransferase (isoleucine patch superfamily).
  
 
 0.660
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.