STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_333[O] COG0625 Glutathione S-transferase; Belongs to the GST superfamily. (206 aa)    
Predicted Functional Partners:
NOR53_178
[I] COG1960 Acyl-CoA dehydrogenases.
       0.773
gstch
[O] COG0625 Glutathione S-transferase.
  
  
  0.739
EED31602.1
[O] COG0625 Glutathione S-transferase.
  
  
  0.680
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.633
acd
[I] COG1960 Acyl-CoA dehydrogenases.
       0.622
gstA
[O] COG0625 Glutathione S-transferase.
  
  
0.606
NOR53_4
acyl-CoA dehydrogenase, C-terminal domain; [I] COG1960 Acyl-CoA dehydrogenases.
       0.605
EED33537.1
[O] COG0625 Glutathione S-transferase.
  
  
  0.572
EED33865.1
glutamyl-tRNA(Gln) amidotransferase C subunit; [O] COG0625 Glutathione S-transferase.
  
  
 0.548
maiA_1
Maleylacetoacetate isomerase; [O] COG0625 Glutathione S-transferase; Belongs to the GST superfamily.
  
  
  0.526
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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