Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EED32096.1Conserved hypothetical protein. (356 aa)    
Predicted Functional Partners:
EED32094.1
Glycosyl transferase, group 1; [M] COG0438 Glycosyltransferase.
 
  
  0.954
EED32095.1
Methyltransferase type 11; [QR] COG0500 SAM-dependent methyltransferases.
 
     0.946
EED32232.1
Transferase hexapeptide repeat containing protein.
 
     0.794
EED32097.1
Secreted protein.
  
   
 0.787
EED33620.1
Diacylglycerol kinase catalytic domain-containing protein; [I] COG1946 Acyl-CoA thioesterase.
  
     0.673
EED32093.1
Conserved hypothetical protein.
       0.551
EED31567.1
[R] COG3552 Protein containing von Willebrand factor type A (vWA) domain.
  
     0.531
EED33428.1
[G] COG1874 Beta-galactosidase.
   
 
  0.526
NOR53_32
Sucrose phosphorylase; [G] COG0366 Glycosidases.
    
 0.522
EED32012.1
Conserved hypothetical protein.
  
     0.510
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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