STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_334Sensor protein PilS; [T] COG0642 Signal transduction histidine kinase. (539 aa)    
Predicted Functional Partners:
NOR53_161
Two component, sigma54 specific, transcriptional regulator, Fis family; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
 
  0.913
EED31684.1
Sensor protein GacS; [T] COG0642 Signal transduction histidine kinase.
 
 
0.859
NOR53_215
[T] COG0642 Signal transduction histidine kinase.
 
 
0.850
EED32586.1
Adenylate cyclase 1 (ATP pyrophosphate-lyase 1); [T] COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
  
 
 0.835
EED33682.1
[T] COG0642 Signal transduction histidine kinase.
 
 
0.811
EED32222.1
[NU] COG3168 Tfp pilus assembly protein PilP.
  
     0.740
EED33004.1
[NU] COG3215 Tfp pilus assembly protein PilZ.
  
     0.738
EED32053.1
[S] COG1652 Uncharacterized protein containing LysM domain.
 
     0.737
EED34033.1
CheB methylesterase/CheR methyltransferase; [NT] COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
    
  0.736
EED33126.1
LysM domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.729
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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