Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
EED32189.1[K] COG1846 Transcriptional regulators. (157 aa)    
Predicted Functional Partners:
EED32190.1
Sulfotransferase; [R] COG0457 FOG: TPR repeat.
 
     0.760
EED32191.1
TonB-dependent receptor, plug; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
       0.739
EED32192.1
Choline-glycine betaine transporter; [R] COG0733 Na+-dependent transporters of the SNF family; Belongs to the BCCT transporter (TC 2.A.15) family.
 
    0.594
EED32348.1
Glycine betaine/L-proline ABC transporter, permease and substrate-binding protein; [M] COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein).
  
  
 0.514
NOR53_431
[T] COG1734 DnaK suppressor protein.
   
  
 0.457
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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