STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfaCyclopropane-fatty-acyl-phospholipid synthase; [QR] COG0500 SAM-dependent methyltransferases. (418 aa)    
Predicted Functional Partners:
EED32182.1
Plasmid partition ParA protein; [S] COG3496 Uncharacterized conserved protein.
  
 0.995
EED32183.1
[E] COG1231 Monoamine oxidase.
  
 0.995
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.719
EED33181.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
   
 0.623
EED32301.1
Conserved hypothetical protein; [S] COG3752 Predicted membrane protein.
 
     0.535
EED32184.1
[T] COG3806 Anti-sigma factor.
 
   
 0.475
NOR53_94
Flagellar protein FlaG protein; [E] COG0506 Proline dehydrogenase.
   
   0.438
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
   
 
 0.404
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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