Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED32183.1[E] COG1231 Monoamine oxidase. (419 aa)    
Predicted Functional Partners:
cfa
Cyclopropane-fatty-acyl-phospholipid synthase; [QR] COG0500 SAM-dependent methyltransferases.
  
 0.996
EED32182.1
Plasmid partition ParA protein; [S] COG3496 Uncharacterized conserved protein.
 
  
 0.966
EED32301.1
Conserved hypothetical protein; [S] COG3752 Predicted membrane protein.
     0.828
EED32184.1
[T] COG3806 Anti-sigma factor.
 
  
 0.804
EED33181.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
   
 0.785
EED31787.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.500
NOR53_59
Photolyase; [R] COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase.
 
   
 0.487
EED33879.1
Putative K+-dependent Na+/Ca+ exchanger; [P] COG0530 Ca2+/Na+ antiporter.
   
    0.430
EED33047.1
DNA photolyase; [L] COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
 
   
 0.419
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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