STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED31998.1Aminotransferase; [M] COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family. (378 aa)    
Predicted Functional Partners:
EED33978.1
Putative UDP-glucose lipid carrier transferase; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
 
 0.978
rfbB
dTDP-glucose 4,6-dehydratase; [MG] COG0451 Nucleoside-diphosphate-sugar epimerases; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.949
EED32002.1
Hypothetical protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis; putative glycosyltransferase Sll0501.
 
  
 0.884
EED33753.1
Polysaccharide biosynthesis protein; [MG] COG0451 Nucleoside-diphosphate-sugar epimerases.
 
 
 0.881
EED31999.1
Bacterial transferase hexapeptide repeat protein; [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase.
 
 
 0.875
EED32003.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
  
 0.875
EED32841.1
[R] COG0673 Predicted dehydrogenases and related proteins.
 
 
 0.775
EED33357.1
[R] COG0673 Predicted dehydrogenases and related proteins.
 
 
 0.772
EED32008.1
[M] COG0381 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.749
EED32850.1
Reductive dehalogenase; [C] COG1600 Uncharacterized Fe-S protein.
 
 
 0.734
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.