STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32100.1Phosphohydrolase; [S] COG3151 Uncharacterized protein conserved in bacteria. (173 aa)    
Predicted Functional Partners:
cpdA
Ser/Thr protein phosphatase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
  
  
 0.791
EED32099.1
Hypothetical protein.
       0.773
NOR53_737
Amino acid transporter protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.729
EED33014.1
Conserved hypothetical protein; [R] COG1399 Predicted metal-binding, possibly nucleic acid-binding protein.
  
     0.691
NOR53_771
[S] COG3139 Uncharacterized protein conserved in bacteria.
  
     0.671
EED32098.1
Type I secretion outer membrane protein, TolC; [MU] COG1538 Outer membrane protein.
 
     0.629
EED32059.1
Putative conserved hypothetical protein; [R] COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain.
  
     0.592
parE
DNA topoisomerase IV, B subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.
       0.578
EED32711.1
TPR repeat region superfamily protein; [S] COG2938 Uncharacterized conserved protein.
  
     0.563
slmA
Transcriptional regulator, TetR family; Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions.
  
     0.562
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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