STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32262.1Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (217 aa)    
Predicted Functional Partners:
EED32567.1
Transferase hexapeptide repeat; [E] COG1045 Serine acetyltransferase.
    
 0.928
EED32058.1
Anhydrase, family 3 protein; [R] COG0110 Acetyltransferase (isoleucine patch superfamily).
    
 0.928
EED32261.1
Low affinity sulfate transporter; [R] COG2252 Permeases.
 
 
 0.783
EED33403.1
[S] COG3002 Uncharacterized protein conserved in bacteria; Belongs to the UPF0753 family.
  
    0.738
EED32637.1
Sulphate transporter; [P] COG0659 Sulfate permease and related transporters (MFS superfamily).
 
 
 0.586
EED33454.1
Putative Phosphate acetyl/butyryl transferase subfamily; [C] COG0281 Malic enzyme.
 
   
 0.487
sulP
[R] COG2252 Permeases.
 
 
 0.475
rimI
[R] COG0456 Acetyltransferases.
    
  0.414
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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