STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32103.1Alkane 1-monooxygenase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (396 aa)    
Predicted Functional Partners:
EED32850.1
Reductive dehalogenase; [C] COG1600 Uncharacterized Fe-S protein.
  
 
 0.824
acdS
Short-chain dehydrogenase/reductase family; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
  0.686
EED31771.1
Hypothetical protein; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); male sterility C-terminal domain.
 
  
 0.626
EED32508.1
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; [ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
     
 0.570
erg
[I] COG3000 Sterol desaturase.
 
 
 0.568
NOR53_349
[I] COG3000 Sterol desaturase.
 
 
 0.528
EED33801.1
Rubredoxin; [C] COG1773 Rubredoxin; Belongs to the rubredoxin family.
 
  
 0.501
NOR53_515
Ferredoxin; [C] COG2871 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF.
 
 
 0.501
atfA
Acyltransferase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.494
EED32104.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.491
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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