Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EED32103.1Alkane 1-monooxygenase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (396 aa)    
Predicted Functional Partners:
EED32850.1
Reductive dehalogenase; [C] COG1600 Uncharacterized Fe-S protein.
  
 
 0.719
EED32508.1
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; [ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
     
 0.667
acdS
Short-chain dehydrogenase/reductase family; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
  0.666
EED31771.1
Hypothetical protein; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); male sterility C-terminal domain.
 
  
 0.582
EED31424.1
[C] COG1454 Alcohol dehydrogenase, class IV.
     
  0.508
NOR53_327
Putative maleylacetate reductase; [C] COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family.
     
  0.508
EED31791.1
[C] COG1454 Alcohol dehydrogenase, class IV.
     
  0.508
atfA
Acyltransferase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.494
EED32104.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.491
EED33801.1
Rubredoxin; [C] COG1773 Rubredoxin; Belongs to the rubredoxin family.
 
 
 0.474
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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