STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
soxYSulfur oxidation protein SoxY; [S] COG5501 Predicted secreted protein. (150 aa)    
Predicted Functional Partners:
soxZ
Sulfur oxidation protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
 
 0.998
soxB
Sulfur oxidation protein SoxB; [F] COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; Belongs to the 5'-nucleotidase family.
 
 
 0.991
EED32281.1
Sulfur oxidation protein SoxX; [C] COG2010 Cytochrome c, mono- and diheme variants.
 
  
 0.970
EED32280.1
Cytochrome c, class I; [C] COG3245 Cytochrome c5.
 
  
 0.970
soxA
Sulfur oxidation protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
  
 0.955
EED32279.1
Mo-co oxidoreductase dimerisation domain; [R] COG2041 Sulfite oxidase and related enzymes.
 
  
 0.939
EED31759.1
Cytochrome c-type.
 
  
 0.931
NOR53_18
Hypothetical protein; [R] COG1073 Hydrolases of the alpha/beta superfamily.
   
 0.923
soxC
[R] COG2041 Sulfite oxidase and related enzymes.
 
  
 0.875
EED34003.1
Sulfide dehydrogenase (flavocytochrome c) flavoprotein chain; [C] COG1252 NADH dehydrogenase, FAD-containing subunit.
 
   
 0.808
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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