Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EED31843.1[L] COG3666 Transposase and inactivated derivatives. (479 aa)    
Predicted Functional Partners:
EED31844.1
Hypothetical protein.
       0.689
EED31841.1
[S] COG2315 Uncharacterized protein conserved in bacteria; protein containing.
       0.492
pyk
[G] COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
       0.492
EED31845.1
Hypothetical protein.
       0.431
EED31840.1
[C] COG0584 Glycerophosphoryl diester phosphodiesterase.
  
    0.421
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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