Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EED31642.1Hdod domain family protein; [T] COG1639 Predicted signal transduction protein. (290 aa)    
Predicted Functional Partners:
EED31684.1
Sensor protein GacS; [T] COG0642 Signal transduction histidine kinase.
 
 
 0.950
NOR53_215
[T] COG0642 Signal transduction histidine kinase.
   
 0.946
EED33682.1
[T] COG0642 Signal transduction histidine kinase.
   
 0.926
EED31595.1
[E] COG0347 Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
  
 0.820
EED31598.1
[E] COG0347 Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
  
 0.820
EED32358.1
[T] COG1639 Predicted signal transduction protein.
  
  
  0.818
EED31610.1
[T] COG1639 Predicted signal transduction protein.
  
  
  0.817
NOR53_690
Hypothetical protein.
   
 0.803
EED31321.1
Hypothetical protein; [T] COG1639 Predicted signal transduction protein; putative metal-dependent phosphohydrolaseHD subdomain taxon:159087.
  
  
  0.781
EED31395.1
Sensor histidine kinase/response regulator; [T] COG0642 Signal transduction histidine kinase.
 
 
 0.749
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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