Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED31855.1Carotenoid cleavage dioxygenase 1; [Q] COG3670 Lignostilbene-alpha,beta-dioxygenase and related enzymes. (500 aa)    
Predicted Functional Partners:
EED31856.1
Transcriptional regulator, HxlR family; [K] COG1733 Predicted transcriptional regulators.
 
     0.821
EED31852.1
Thiolase family protein; [I] COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
     0.817
EED31853.1
[IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
 
   0.657
EED32771.1
Acyltransferase, putative; [I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
     0.604
nnrE
Ribosomal protein S15; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both ep [...]
      
 0.581
EED31854.1
2-nitropropane dioxygenase, NPD; [R] COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
       0.537
EED31605.1
phytanoyl-CoA dioxygenase (PhyH) family protein; [Q] COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin.
  
   
 0.479
EED31851.1
[I] COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.441
NOR53_897
[I] COG1562 Phytoene/squalene synthetase.
     
 0.434
EED33146.1
[I] COG0183 Acetyl-CoA acetyltransferase.
  
     0.423
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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