Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EED32274.1YeeE/YedE family protein; [R] COG2391 Predicted transporter component; overlaps another CDS with the same product name. (177 aa)    
Predicted Functional Partners:
EED32273.1
YeeE/YedE family protein; [R] COG2391 Predicted transporter component; overlaps another CDS with the same product name.
 
    0.952
NOR53_798
Putative rhodanese domain protein; [R] COG2391 Predicted transporter component.
 
    0.773
EED32275.1
Metallo-beta-lactamase superfamily protein; [R] COG0491 Zn-dependent hydrolases, including glyoxylases.
 
     0.629
EED32272.1
Na+/H+ antiporter; [P] COG0475 Kef-type K+ transport systems, membrane components; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
       0.535
EED32536.1
Nickel-dependent hydrogenases b-type cytochrome subunit family; [C] COG1969 Ni,Fe-hydrogenase I cytochrome b subunit.
 
     0.406
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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