Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED32292.1[R] COG4106 Trans-aconitate methyltransferase. (195 aa)    
Predicted Functional Partners:
EED32290.1
[R] COG0824 Predicted thioesterase.
 
     0.602
EED32291.1
Voltage-gated sodium channel subunit; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.572
EED33166.1
D-cysteine desulfhydrase; [E] COG0133 Tryptophan synthase beta chain.
     
  0.460
EED34003.1
Sulfide dehydrogenase (flavocytochrome c) flavoprotein chain; [C] COG1252 NADH dehydrogenase, FAD-containing subunit.
  
    0.455
EED32293.1
Major facilitator superfamily protein; [G] COG2211 Na+/melibiose symporter and related transporters.
       0.440
EED31463.1
Omega-amino acid--pyruvate aminotransferase; [E] COG4992 Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.432
EED31713.1
Aminotransferase, class III; [H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.432
EED31784.1
Aminotransferase, class III; [E] COG4992 Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.432
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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