Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_350Conserved hypothetical protein. (173 aa)    
Predicted Functional Partners:
NOR53_229
Conserved hypothetical protein.
       0.817
NOR53_41
Fimbrial assembly protein.
       0.712
gspD_2
General secretion pathway protein D; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
     
 0.672
NOR53_121
General secretory pathway protein K.
     
 0.569
gspH_2
General secretion protein H; [NU] COG4970 Tfp pilus assembly protein FimT.
       0.567
NOR53_137
General secretion pathway protein I; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.561
gspJ_2
General secretion pathway protein J.
       0.517
EED33803.1
Putative general secretion pathway M protein; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
     
  0.512
NOR53_98
Hypothetical protein.
       0.455
gspG_2
General secretion pathway protein G; [NU] COG2165 Type II secretory pathway, pseudopilin PulG.
       0.409
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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