STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED31701.1[GEPR] COG0477 Permeases of the major facilitator superfamily; overlaps another CDS with the same product name. (387 aa)    
Predicted Functional Partners:
EED31700.1
[GEPR] COG0477 Permeases of the major facilitator superfamily; overlaps another CDS with the same product name.
 
    
0.837
EED31540.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.570
EED32548.1
Conserved hypothetical protein.
  
     0.567
NOR53_69
Pe_pgrs family protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.559
EED31702.1
[P] COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid.
       0.536
EED32266.1
Gamma-glutamylputrescine oxidoreductase; [E] COG0665 Glycine/D-amino acid oxidases (deaminating).
  
     0.535
EED32617.1
ABC transporter, permease protein, putative; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.515
EED31457.1
Gamma-glutamylputrescine oxidoreductase; [E] COG0665 Glycine/D-amino acid oxidases (deaminating).
  
     0.497
phaF
Polyhydroxyalkanoate synthesis protein PhaF; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.457
EED31783.1
Glutamate--ammonia ligase; [R] COG3968 Uncharacterized protein related to glutamine synthetase.
  
     0.435
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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