STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32169.1Peptidase C26; [F] COG0518 GMP synthase - Glutamine amidotransferase domain. (190 aa)    
Predicted Functional Partners:
EED32170.1
Conserved hypothetical protein.
 
     0.892
EED33303.1
Dipeptidase 1; [E] COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog.
      0.831
EED32226.1
[E] COG0070 Glutamate synthase domain 3.
    
  0.708
EED33695.1
Putative aminotransferase class III (putative 4-aminobutyrate aminotransferase); [E] COG4992 Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.661
EED31456.1
[E] COG0174 Glutamine synthetase.
 
 
 0.641
EED32267.1
[E] COG0174 Glutamine synthetase.
 
 
 0.639
NOR53_91
Tyrosine decarboxylase 1; [E] COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
  
  
  0.618
glnA_2
[E] COG0174 Glutamine synthetase.
  
 
 0.591
glnA_1
[R] COG3968 Uncharacterized protein related to glutamine synthetase.
  
 
 0.591
EED31783.1
Glutamate--ammonia ligase; [R] COG3968 Uncharacterized protein related to glutamine synthetase.
  
 
 0.591
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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