STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32258.1[G] COG3386 Gluconolactonase. (290 aa)    
Predicted Functional Partners:
mxaF
Methanol dehydrogenase protein, large subunit; [C] COG2010 Cytochrome c, mono- and diheme variants.
     
 0.694
NOR53_636
Alcohol dehydrogenase (acceptor); [S] COG1520 FOG: WD40-like repeat.
     
 0.694
ilvD
[EG] COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
    
 0.616
EED32259.1
Conserved hypothetical protein.
       0.605
EED31826.1
Glyoxylate reductase; [CHR] COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.601
NOR53_631
Putative gluconate 2-dehydrogenase flavoprotein; [E] COG2303 Choline dehydrogenase and related flavoproteins.
  
 
 0.598
EED33674.1
[I] COG0657 Esterase/lipase.
 
 
 0.588
EED34040.1
Isochorismatase hydrolase; [Q] COG1335 Amidases related to nicotinamidase.
   
 
  0.571
EED32257.1
[I] COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
    0.571
NOR53_937
Mandelate racemase/muconate lactonizing enzyme family protein; [MR] COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily.
    
 0.527
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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