Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED32258.1[G] COG3386 Gluconolactonase. (290 aa)    
Predicted Functional Partners:
EED33428.1
[G] COG1874 Beta-galactosidase.
    
  0.779
ilvD
[EG] COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
    
 0.685
EED31826.1
Glyoxylate reductase; [CHR] COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.674
mxaF
Methanol dehydrogenase protein, large subunit; [C] COG2010 Cytochrome c, mono- and diheme variants.
     
 0.608
NOR53_636
Alcohol dehydrogenase (acceptor); [S] COG1520 FOG: WD40-like repeat.
     
 0.608
EED32259.1
Conserved hypothetical protein.
       0.605
EED32257.1
[I] COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
    0.575
EED34040.1
Isochorismatase hydrolase; [Q] COG1335 Amidases related to nicotinamidase.
   
 
  0.572
EED33674.1
[I] COG0657 Esterase/lipase.
 
 
  0.547
NOR53_631
Putative gluconate 2-dehydrogenase flavoprotein; [E] COG2303 Choline dehydrogenase and related flavoproteins.
   
 
 0.547
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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