Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED31657.1Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (606 aa)    
Predicted Functional Partners:
EED31656.1
methylcrotonoyl-CoA carboxylase beta chain; [I] COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
 
 
 0.918
hmgA
[Q] COG3508 Homogentisate 1,2-dioxygenase.
  
 0.849
EED31654.1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain; [I] COG0439 Biotin carboxylase.
  
 
 0.840
EED32676.1
Putative methylmalonyl-CoA decarboxylasealpha-subunit; [I] COG0825 Acetyl-CoA carboxylase alpha subunit.
 
 
 0.816
EED31655.1
[I] COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 
  0.718
EED32900.1
[I] COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding).
    
 0.672
EED31664.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; [C] COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
    
 0.642
EED31658.1
Transcriptional regulator, TetR family; [S] COG3226 Uncharacterized protein conserved in bacteria.
 
     0.632
EED32897.1
[I] COG0777 Acetyl-CoA carboxylase beta subunit.
  
 
 0.628
NOR53_294
methylcrotonoyl-CoA carboxylase beta chain; [I] COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
  
 
 0.628
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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