STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32330.1PaaX domain protein, C-terminal domain; [K] COG3327 Phenylacetic acid-responsive transcriptional repressor. (267 aa)    
Predicted Functional Partners:
EED32329.1
[I] COG3239 Fatty acid desaturase.
 
     0.853
EED32331.1
[O] COG0625 Glutathione S-transferase.
       0.732
EED32332.1
Lipid-binding start domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.732
EED31435.1
Conserved hypothetical protein.
  
     0.555
EED32334.1
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; [C] COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs.
       0.527
EED32333.1
Isoquinoline 1-oxidoreductase alpha subunit; [C] COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs.
       0.527
EED33046.1
[K] COG0846 NAD-dependent protein deacetylases, SIR2 family.
   
    0.521
EED32019.1
Silent information regulator protein Sir2; [K] COG0846 NAD-dependent protein deacetylases, SIR2 family.
   
    0.521
gspI
General secretion pathway protein I; [NU] COG2165 Type II secretory pathway, pseudopilin PulG.
  
 
   0.481
NOR53_228
Hypothetical protein.
  
     0.477
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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