Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
NOR53_354Endonuclease/exonuclease/phosphatase; [S] COG4222 Uncharacterized protein conserved in bacteria. (395 aa)    
Predicted Functional Partners:
EED31840.1
[C] COG0584 Glycerophosphoryl diester phosphodiesterase.
      0.625
EED31772.1
Acyltransferase family protein; [I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
  0.544
NOR53_160
RND efflux system, outer membrane lipoprotein, NodT; [MU] COG1538 Outer membrane protein.
       0.513
NOR53_236
Secretion protein HlyD; [V] COG1566 Multidrug resistance efflux pump.
       0.513
NOR53_328
Transporter, PerM family; [R] COG0628 Predicted permease.
       0.513
EED31648.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.494
EED31817.1
Aminotransferase, class V; [E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
    
   0.494
EED31729.1
Pyridoxal phosphate dependent enzyme; [E] COG0520 Selenocysteine lyase.
    
   0.494
NOR53_32
Sucrose phosphorylase; [G] COG0366 Glycosidases.
  
 
  0.472
EED32601.1
Inositol-1-monophosphatase; [G] COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family.
     
  0.435
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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