Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED31793.1Peptidase S8 and S53, subtilisin, kexin, sedolisin; [O] COG1404 Subtilisin-like serine proteases; Belongs to the peptidase S8 family. (960 aa)    
Predicted Functional Partners:
EED31794.1
Lytic transglycosylase, catalytic; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding protein 3 family.
       0.773
EED31792.1
Alcohol dehydrogenase, zinc-binding domain protein; [ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
  
    0.746
EED32537.1
[C] COG2863 Cytochrome c553.
   
 0.711
NOR53_395
Peptidase S8 and S53, subtilisin, kexin, sedolisin; [O] COG1404 Subtilisin-like serine proteases.
  
     0.612
EED33721.1
[J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
  
 0.593
EED31438.1
[Q] COG2124 Cytochrome P450.
  
  0.581
gmk
Guanylate kinase; [P] COG3709 Uncharacterized component of phosphonate metabolism.
     
  0.539
EED31937.1
[F] COG0194 Guanylate kinase.
     
  0.539
EED33376.1
[Q] COG2124 Cytochrome P450.
   
  0.509
EED32848.1
[Q] COG2124 Cytochrome P450.
   
  0.509
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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