STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32301.1Conserved hypothetical protein; [S] COG3752 Predicted membrane protein. (295 aa)    
Predicted Functional Partners:
EED32183.1
[E] COG1231 Monoamine oxidase.
    0.806
EED32299.1
[K] COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain.
       0.648
waaM
[M] COG1560 Lauroyl/myristoyl acyltransferase.
       0.648
EED32182.1
Plasmid partition ParA protein; [S] COG3496 Uncharacterized conserved protein.
 
     0.563
cfa
Cyclopropane-fatty-acyl-phospholipid synthase; [QR] COG0500 SAM-dependent methyltransferases.
 
     0.535
EED33047.1
DNA photolyase; [L] COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
 
     0.522
EED32302.1
Metal-dependent phosphohydrolase, HD subdomain; [R] COG4341 Predicted HD phosphohydrolase.
       0.502
NOR53_262
[L] COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
 
     0.492
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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