STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_355Glycosyl transferase, family 2; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis. (317 aa)    
Predicted Functional Partners:
NOR53_173
Polysaccharide biosynthesis protein; [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.859
NOR53_220
Cell wall biogenesis protein (WbpE); [E] COG0436 Aspartate/tyrosine/aromatic aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.827
EED33978.1
Putative UDP-glucose lipid carrier transferase; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.700
EED33956.1
Glycosyl transferase, family 2; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
     0.666
NOR53_47
Glycosyl transferase, family 2; [M] COG0438 Glycosyltransferase.
  
 
 0.658
EED31672.1
Glycosyl transferase, WecB/TagA/CpsF family; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.576
NOR53_415
Hypothetical protein.
       0.564
NOR53_423
Conserved hypothetical protein.
       0.564
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
 
 0.464
rfbB
dTDP-glucose 4,6-dehydratase; [MG] COG0451 Nucleoside-diphosphate-sugar epimerases; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.462
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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