Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED31875.1[E] COG0006 Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family. (452 aa)    
Predicted Functional Partners:
EED31873.1
Protein VisC; [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
 
 
 0.848
EED31876.1
[S] COG3079 Uncharacterized protein conserved in bacteria; Belongs to the UPF0149 family.
 
   
 0.832
EED31874.1
[HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
  
 
 0.822
EED31878.1
Conserved hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
 
   
 0.757
etfA
[C] COG2025 Electron transfer flavoprotein, alpha subunit.
   
  0.569
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
       0.565
EED32950.1
Succinylglutamate desuccinylase/aspartoacylase; [R] COG3608 Predicted deacylase.
    
 0.557
NOR53_463
Succinylglutamate desuccinylase/aspartoacylase; [R] COG3608 Predicted deacylase.
    
 0.557
EED31877.1
Conserved hypothetical protein TIGR02449; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.547
gcvT
[E] COG0404 Glycine cleavage system T protein (aminomethyltransferase).
  
 0.543
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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