STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wztABC transporter ATP-binding protein; [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component. (239 aa)    
Predicted Functional Partners:
EED32014.1
Putative ABC-2 type transporter; [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
 0.997
NOR53_245
Hypothetical protein; [V] COG0842 ABC-type multidrug transport system, permease component; ABC-2.
 
 0.990
NOR53_501
Hypothetical protein; [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
 0.977
EED33965.1
[M] COG1596 Periplasmic protein involved in polysaccharide export.
  
  
 0.704
EED31677.1
[M] COG1596 Periplasmic protein involved in polysaccharide export.
  
  
 0.704
NOR53_47
Glycosyl transferase, family 2; [M] COG0438 Glycosyltransferase.
 
 
 0.643
EED32237.1
Phosphoribosyltransferase; [R] COG1040 Predicted amidophosphoribosyltransferases.
   
    0.627
EED32015.1
Glycosyl transferase, group 1; [M] COG0438 Glycosyltransferase.
 
 
 0.615
EED33931.1
Conserved hypothetical protein.
  
  
 0.594
NOR53_57
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; [G] COG0662 Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.554
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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