Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED32126.1Hamp domain protein; [NT] COG0840 Methyl-accepting chemotaxis protein. (791 aa)    
Predicted Functional Partners:
EED32125.1
[T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.
 
 0.999
NOR53_215
[T] COG0642 Signal transduction histidine kinase.
 
 
 0.998
EED33682.1
[T] COG0642 Signal transduction histidine kinase.
 
 
 0.998
EED31679.1
Glycosyl transferase WecB/TagA/CpsF family; [M] COG1922 Teichoic acid biosynthesis proteins; Belongs to the glycosyltransferase 26 family.
  
 0.998
EED31684.1
Sensor protein GacS; [T] COG0642 Signal transduction histidine kinase.
 
 
 0.998
NOR53_774
Anti-sigma-factor antagonist; [T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
  
 0.998
NOR53_158
Flagellar biosynthesis sigma factor FliA; [K] COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); Belongs to the sigma-70 factor family.
  
 
 0.991
EED31683.1
Putative Heme NO binding; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
    0.984
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
    0.975
fliG
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
    0.975
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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