STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED31605.1phytanoyl-CoA dioxygenase (PhyH) family protein; [Q] COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin. (301 aa)    
Predicted Functional Partners:
EED31606.1
Conserved hypothetical protein.
       0.682
EED33535.1
Hypothetical protein; Putative probable phytanoil-CoA alpha hydroxylase.
  
     0.679
EED33146.1
[I] COG0183 Acetyl-CoA acetyltransferase.
  
 
  0.665
EED31666.1
[I] COG2937 Glycerol-3-phosphate O-acyltransferase; Belongs to the GPAT/DAPAT family.
  
 
 0.634
NOR53_45
Puromycin N-acetyltransferase; [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
  
  0.631
EED33437.1
Putative metapyrocatechase 2; [E] COG0346 Lactoylglutathione lyase and related lyases.
  
    0.584
NOR53_412
Amidohydrolase 3; [F] COG1001 Adenine deaminase.
  
     0.553
EED31772.1
Acyltransferase family protein; [I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
  
     0.536
EED31855.1
Carotenoid cleavage dioxygenase 1; [Q] COG3670 Lignostilbene-alpha,beta-dioxygenase and related enzymes.
  
   
 0.510
EED33674.1
[I] COG0657 Esterase/lipase.
  
  
 0.481
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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