STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32114.1[P] COG1629 Outer membrane receptor proteins, mostly Fe transport. (730 aa)    
Predicted Functional Partners:
EED31888.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
 
 0.795
EED31474.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
 0.734
EED33230.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.725
EED32115.1
Putative glyoxalase/bleomycin resistance protein/dioxygenase; [E] COG0346 Lactoylglutathione lyase and related lyases.
       0.658
EED31858.1
Periplasmic protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.623
EED32116.1
NADPH-dependent fmn reductase; [R] COG0655 Multimeric flavodoxin WrbA.
  
    0.617
EED33597.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.535
paaF
phenylacetate-CoA ligase; [H] COG1541 Coenzyme F390 synthetase.
       0.531
EED32118.1
[E] COG0620 Methionine synthase II (cobalamin-independent).
       0.524
EED33341.1
Transporter, OMR family; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
 
  0.522
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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