STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED31645.1[R] COG2166 SufE protein probably involved in Fe-S center assembly. (147 aa)    
Predicted Functional Partners:
EED31648.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 0.997
EED31817.1
Aminotransferase, class V; [E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
  
 0.918
sufB
FeS assembly protein SufB; [O] COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
 
 0.905
sufD
FeS assembly protein SufD; [O] COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
 
 0.897
sufC
FeS assembly ATPase SufC; [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase.
 
   0.895
EED31729.1
Pyridoxal phosphate dependent enzyme; [E] COG0520 Selenocysteine lyase.
  
 0.806
sufT
Probable FeS assembly SUF system protein SufT; [D] COG0489 ATPases involved in chromosome partitioning.
 
     0.784
EED31647.1
ATPase; [S] COG0316 Uncharacterized conserved protein; Belongs to the HesB/IscA family.
  
  
 0.736
EED32130.1
Selenide, water dikinase; [C] COG1252 NADH dehydrogenase, FAD-containing subunit.
     
 0.683
iscR
Iron-sulfur cluster assembly transcription factor IscR; Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins.
     
 0.487
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.