STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED31985.1Integrase, catalytic region; [L] COG2801 Transposase and inactivated derivatives. (136 aa)    
Predicted Functional Partners:
EED31984.1
Integrase, catalytic region; [L] COG2801 Transposase and inactivated derivatives.
     0.983
EED31995.1
Integrase, catalytic region; [L] COG2801 Transposase and inactivated derivatives.
 
     0.949
EED31986.1
Transposase IS3/family protein; [L] COG2801 Transposase and inactivated derivatives.
    0.856
EED31119.1
Integrase, catalytic region; [L] COG2801 Transposase and inactivated derivatives.
 
     0.807
EED31993.1
Transposase IS3/family protein.
 
    0.685
EED32006.1
Integrase, catalytic domain; [L] COG2801 Transposase and inactivated derivatives.
  
     0.634
EED31987.1
Integrase, catalytic region; [L] COG2801 Transposase and inactivated derivatives.
       0.499
EED31988.1
Integrase, catalytic region; [L] COG2801 Transposase and inactivated derivatives.
       0.400
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.