Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
paaFphenylacetate-CoA ligase; [H] COG1541 Coenzyme F390 synthetase. (449 aa)    
Predicted Functional Partners:
EED32850.1
Reductive dehalogenase; [C] COG1600 Uncharacterized Fe-S protein.
  
 
 0.854
EED32118.1
[E] COG0620 Methionine synthase II (cobalamin-independent).
       0.762
NOR53_377
enoyl-CoA hydratase/isomerase family protein; [I] COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.671
EED31142.1
[IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
  
  0.668
EED32116.1
NADPH-dependent fmn reductase; [R] COG0655 Multimeric flavodoxin WrbA.
       0.661
urtE
Urea ABC transporter, ATP-binding protein UrtE; [G] COG1129 ABC-type sugar transport system, ATPase component.
 
 
  0.654
EED34056.1
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; [R] COG0388 Predicted amidohydrolase.
     
  0.647
EED33542.1
[IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
  
  0.641
sufT
Probable FeS assembly SUF system protein SufT; [D] COG0489 ATPases involved in chromosome partitioning.
    
 0.628
EED32115.1
Putative glyoxalase/bleomycin resistance protein/dioxygenase; [E] COG0346 Lactoylglutathione lyase and related lyases.
       0.619
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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