STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED31715.1Hypothetical protein. (225 aa)    
Predicted Functional Partners:
EED31714.1
LytTr DNA-binding domain family protein; [KT] COG3279 Response regulator of the LytR/AlgR family.
 
     0.750
ccoO
[C] COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
  
    0.688
EED31716.1
Hypothetical protein.
       0.655
ccoN
[C] COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.578
ppk_1
Polyphosphate kinase 2; [S] COG2326 Uncharacterized conserved protein.
   
    0.522
EED32344.1
PvdS; [S] COG2326 Uncharacterized conserved protein.
   
    0.522
EED31439.1
Conserved domain protein.
  
     0.509
EED31446.1
Haloalkane dehalogenase; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.441
EED31780.1
Glutathione-regulated potassium-efflux system protein KefC; [P] COG1226 Kef-type K+ transport systems, predicted NAD-binding component; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
   
 0.428
NOR53_225
[S] COG2841 Uncharacterized protein conserved in bacteria.
   
    0.403
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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