Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED31784.1Aminotransferase, class III; [E] COG4992 Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (456 aa)    
Predicted Functional Partners:
EED31783.1
Glutamate--ammonia ligase; [R] COG3968 Uncharacterized protein related to glutamine synthetase.
  
  0.871
kbl
2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
  
 
 0.832
EED32267.1
[E] COG0174 Glutamine synthetase.
  
  0.824
EED32266.1
Gamma-glutamylputrescine oxidoreductase; [E] COG0665 Glycine/D-amino acid oxidases (deaminating).
 
  
  0.802
EED31457.1
Gamma-glutamylputrescine oxidoreductase; [E] COG0665 Glycine/D-amino acid oxidases (deaminating).
 
  
  0.798
EED32226.1
[E] COG0070 Glutamate synthase domain 3.
     
 0.788
EED31456.1
[E] COG0174 Glutamine synthetase.
 
  
  0.767
glnA_2
[E] COG0174 Glutamine synthetase.
  
  0.727
EED31219.1
Putative FAD dependent oxidoreductase; [E] COG0665 Glycine/D-amino acid oxidases (deaminating).
 
  
  0.697
EED31664.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; [C] COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
    
  0.673
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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