Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
NOR53_373Twin-arginine translocation pathway signal; [R] COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold. (351 aa)    
Predicted Functional Partners:
NOR53_393
[M] COG0845 Membrane-fusion protein; putative efflux transporterRND family, MFP subunit taxon:351745; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.601
NOR53_175
Cytochrome c, class I; [C] COG2863 Cytochrome c553.
       0.528
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
 
 
   0.514
NOR53_89
RND family efflux transporter; [P] COG3696 Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.503
NOR53_603
Oxidoreductase htatip2; [MG] COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
 
    0.413
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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