STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_397Peptidase M48, Ste24p; [O] COG0501 Zn-dependent protease with chaperone function. (481 aa)    
Predicted Functional Partners:
NOR53_288
Hypothetical protein.
       0.799
NOR53_322
Hypothetical protein.
       0.799
NOR53_351
Periplasmic amidohydrolase family protein; [R] COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold.
       0.542
NOR53_416
Secreted protein, containing von Willebrand factor (vWF) type A domain.
 
     0.522
NOR53_199
Putative secreted proteincontaining von Willebrand factor (vWF) type A domain taxon:283942.
 
     0.508
NOR53_69
Pe_pgrs family protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.482
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.