Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NOR53_398PEGA domain family protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (686 aa)    
Predicted Functional Partners:
NOR53_69
Pe_pgrs family protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.901
NOR53_6
Tetratricopeptide repeat domain protein; [D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
 
 0.870
NOR53_199
Putative secreted proteincontaining von Willebrand factor (vWF) type A domain taxon:283942.
 
     0.822
NOR53_416
Secreted protein, containing von Willebrand factor (vWF) type A domain.
 
     0.822
NOR53_230
Conserved hypothetical protein.
       0.797
NOR53_257
Hypothetical protein.
       0.776
EED32351.1
Probable methyltransferase; [S] COG4301 Uncharacterized conserved protein.
  
 
 0.685
EED31507.1
Transcriptional regulator, LuxR family; [K] COG2771 DNA-binding HTH domain-containing proteins.
 
     0.524
NOR53_267
Hypothetical protein.
       0.483
EED31748.1
Macrolide export ATP-binding/permease protein MacB; [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
    0.477
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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