STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_412Amidohydrolase 3; [F] COG1001 Adenine deaminase. (593 aa)    
Predicted Functional Partners:
EED31605.1
phytanoyl-CoA dioxygenase (PhyH) family protein; [Q] COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin.
  
     0.553
EED33217.1
Dsba oxidoreductase; [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase.
  
     0.546
NOR53_163
Hypothetical protein; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; putative amino acid ABC transporterperiplasmic amino acid-binding protein taxon:380703; Belongs to the bacterial solute-binding protein 3 family.
       0.532
EED33259.1
Hydrolase, alpha/beta fold family; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.497
NOR53_79
ferredoxin--NADP reductase; [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
       0.479
NOR53_105
[S] COG3803 Uncharacterized protein conserved in bacteria.
       0.425
NOR53_197
Putative DUF81; [R] COG0730 Predicted permeases.
       0.413
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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