Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
NOR53_416Secreted protein, containing von Willebrand factor (vWF) type A domain. (331 aa)    
Predicted Functional Partners:
NOR53_199
Putative secreted proteincontaining von Willebrand factor (vWF) type A domain taxon:283942.
 
    
0.869
NOR53_398
PEGA domain family protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.822
NOR53_69
Pe_pgrs family protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.807
NOR53_208
Hypothetical protein.
       0.801
NOR53_255
Hypothetical protein.
       0.801
EED31804.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.644
EED31540.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.594
NOR53_987
Conserved hypothetical protein.
  
     0.580
NOR53_73
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.571
NOR53_308
Hypothetical protein.
  
     0.559
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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