STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_42Conserved hypothetical protein. (84 aa)    
Predicted Functional Partners:
NOR53_951
[H] COG3201 Nicotinamide mononucleotide transporter.
 
     0.769
NOR53_712
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
     0.762
NOR53_300
Putative acyl carrier protein phosphodiesterase; [S] COG3124 Uncharacterized protein conserved in bacteria.
       0.709
EED31857.1
Tetratricopeptide TPR_2; [R] COG0457 FOG: TPR repeat.
  
     0.689
EED33313.1
Conserved hypothetical protein; [S] COG3767 Uncharacterized low-complexity protein.
  
     0.661
EED31858.1
Periplasmic protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
     0.655
NOR53_763
Methyltransferase type 11; [R] COG4798 Predicted methyltransferase.
  
     0.618
EED33258.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.615
EED31733.1
Patatin; [R] COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
  
     0.613
NOR53_371
Hypothetical protein.
       0.579
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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