rplI protein (gamma proteobacterium NOR53) - STRING interaction network

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Score

rplI

Ribosomal protein L9; Binds to the 23S rRNA. (149 aa)

Predicted Functional Partners:

rpsF

0.998

rplO

0.998

NOR53_302

0.998

rplD

0.998

rpsD

0.997

rplQ

0.997

rplS

0.997

rplL

0.997

rplJ

0.997

rpsQ

0.997

Your Current Organism:

gamma proteobacterium NOR53

NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3

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... functional annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NOR53_302	rplD	NOR53_302	NOR53_309	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.	Ribosomal protein, L4/L1 family; Forms part of the polypeptide exit tunnel.	0.999
NOR53_302	rplI	NOR53_302	NOR53_425	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.	Ribosomal protein L9; Binds to the 23S rRNA.	0.998
NOR53_302	rplJ	NOR53_302	NOR53_238	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.	[J] COG0244 Ribosomal protein L10.	0.998
NOR53_302	rplL	NOR53_302	NOR53_224	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.	Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	0.998
NOR53_302	rplO	NOR53_302	NOR53_26	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.	Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.999
NOR53_302	rplQ	NOR53_302	NOR53_200	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.	[J] COG0203 Ribosomal protein L17.	0.998
NOR53_302	rplS	NOR53_302	NOR53_2182	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.997
NOR53_302	rpsD	NOR53_302	NOR53_193	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.999
NOR53_302	rpsF	NOR53_302	NOR53_111	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.	Na+/solute symporter; Binds together with S18 to 16S ribosomal RNA.	0.997
NOR53_302	rpsQ	NOR53_302	NOR53_286	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.999
rplD	NOR53_302	NOR53_309	NOR53_302	Ribosomal protein, L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.	0.999
rplD	rplI	NOR53_309	NOR53_425	Ribosomal protein, L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein L9; Binds to the 23S rRNA.	0.998
rplD	rplJ	NOR53_309	NOR53_238	Ribosomal protein, L4/L1 family; Forms part of the polypeptide exit tunnel.	[J] COG0244 Ribosomal protein L10.	0.998
rplD	rplL	NOR53_309	NOR53_224	Ribosomal protein, L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	0.997
rplD	rplO	NOR53_309	NOR53_26	Ribosomal protein, L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.999
rplD	rplQ	NOR53_309	NOR53_200	Ribosomal protein, L4/L1 family; Forms part of the polypeptide exit tunnel.	[J] COG0203 Ribosomal protein L17.	0.998
rplD	rplS	NOR53_309	NOR53_2182	Ribosomal protein, L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.997
rplD	rpsD	NOR53_309	NOR53_193	Ribosomal protein, L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.999
rplD	rpsF	NOR53_309	NOR53_111	Ribosomal protein, L4/L1 family; Forms part of the polypeptide exit tunnel.	Na+/solute symporter; Binds together with S18 to 16S ribosomal RNA.	0.997
rplD	rpsQ	NOR53_309	NOR53_286	Ribosomal protein, L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.999