Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rimK_2[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); Belongs to the RimK family. (383 aa)    
Predicted Functional Partners:
rimK_1
Ribosomal protein S6 modification protein, C terminal domain; [O] COG4067 Uncharacterized protein conserved in archaea.
     0.976
NOR53_463
Succinylglutamate desuccinylase/aspartoacylase; [R] COG3608 Predicted deacylase.
 
     0.909
EED32226.1
[E] COG0070 Glutamate synthase domain 3.
    
 0.800
NOR53_877
ATP-dependent Zn protease; [O] COG4067 Uncharacterized protein conserved in archaea.
 
     0.779
EED32048.1
Potassium uptake protein TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.
  
 
 0.762
EED32950.1
Succinylglutamate desuccinylase/aspartoacylase; [R] COG3608 Predicted deacylase.
 
     0.737
EED33720.1
Succinylglutamate desuccinylase/aspartoacylase; [R] COG3608 Predicted deacylase.
 
     0.707
EED31780.1
Glutathione-regulated potassium-efflux system protein KefC; [P] COG1226 Kef-type K+ transport systems, predicted NAD-binding component; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.687
EED31684.1
Sensor protein GacS; [T] COG0642 Signal transduction histidine kinase.
     
 0.686
argA_1
Amino-acid N-acetyltransferase; [E] COG1246 N-acetylglutamate synthase and related acetyltransferases; Belongs to the acetyltransferase family. ArgA subfamily.
    
 0.653
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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