Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
NOR53_497C4-dicarboxylate anaerobic carrier; [C] COG2851 H+/citrate symporter. (463 aa)    
Predicted Functional Partners:
NOR53_618
[E] COG3741 N-formylglutamate amidohydrolase.
 
     0.729
NOR53_548
Conserved hypothetical protein.
       0.580
NOR53_499
[S] COG3812 Uncharacterized protein conserved in bacteria.
       0.489
nhaC
[C] COG1757 Na+/H+ antiporter.
 
     0.479
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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