Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
NOR53_522Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit; BNR repeat, putative. (387 aa)    
Predicted Functional Partners:
EED31888.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
    
  0.815
EED32033.1
Conserved hypothetical protein.
 
 
 0.763
tesA
acyl-CoA thioesterase I; [E] COG2755 Lysophospholipase L1 and related esterases.
  
 
  0.618
EED33721.1
[J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
  
 0.578
NOR53_673
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins.
       0.563
NOR53_677
Redoxin superfamily protein; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins.
       0.535
EED32644.1
Porin.
   
 
  0.533
EED33625.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.529
NOR53_592
Conserved hypothetical protein.
  
     0.519
EED33174.1
Hypothetical protein.
  
     0.508
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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