Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
NOR53_532[I] COG1946 Acyl-CoA thioesterase. (260 aa)    
Predicted Functional Partners:
NOR53_535
[S] COG4805 Uncharacterized protein conserved in bacteria.
 
     0.783
EED33190.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.613
EED32759.1
Hypothetical protein; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); alpha/beta hydrolase fold.
  
  
  0.560
EED33468.1
Transporter, OMR family; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.523
lys1_3
Saccharopine dehydrogenase; [S] COG3268 Uncharacterized conserved protein.
  
     0.487
EED32644.1
Porin.
  
     0.480
NOR53_518
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.461
EED32191.1
TonB-dependent receptor, plug; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.442
EED32803.1
[I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III.
  
     0.428
lys1_1
Saccharopine dehydrogenase; [S] COG3268 Uncharacterized conserved protein.
  
     0.416
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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