STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_535[S] COG4805 Uncharacterized protein conserved in bacteria. (616 aa)    
Predicted Functional Partners:
NOR53_532
[I] COG1946 Acyl-CoA thioesterase.
 
     0.784
EED31888.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.676
NOR53_763
Methyltransferase type 11; [R] COG4798 Predicted methyltransferase.
  
    0.594
EED31834.1
[P] COG4772 Outer membrane receptor for Fe3+-dicitrate.
  
     0.592
EED33993.1
Methyltransferase type 11; [R] COG4798 Predicted methyltransferase.
  
    0.587
EED31451.1
O-methyltransferase; [R] COG4798 Predicted methyltransferase.
  
    0.569
EED32903.1
[S] COG4805 Uncharacterized protein conserved in bacteria.
  
     0.567
EED31850.1
Peptidase M28; [R] COG2234 Predicted aminopeptidases.
  
     0.565
EED32498.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.510
EED33341.1
Transporter, OMR family; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
     0.508
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.