STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_579N-carbamoyl-L-amino acid hydrolase; [R] COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase. (429 aa)    
Predicted Functional Partners:
NOR53_581
X-Pro dipeptidyl-peptidase, S15 family; [U] COG0823 Periplasmic component of the Tol biopolymer transport system.
 
     0.752
argD
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
  
 
 0.740
argA_1
Amino-acid N-acetyltransferase; [E] COG1246 N-acetylglutamate synthase and related acetyltransferases; Belongs to the acetyltransferase family. ArgA subfamily.
  
 
 0.710
EED31694.1
[F] COG0167 Dihydroorotate dehydrogenase; Belongs to the dihydroorotate dehydrogenase family.
  
 0.604
EED32526.1
Putative urate catabolism protein; [G] COG0726 Predicted xylanase/chitin deacetylase.
 
  
  0.569
NOR53_477
TPR repeat-containing protein; [R] COG0457 FOG: TPR repeat.
       0.561
EED32227.1
Glutamate synthase small chain; [O] COG0492 Thioredoxin reductase.
  
 
  0.532
NOR53_617
Putative esterase.
 
     0.512
NOR53_491
TPR repeat-containing protein; [R] COG0457 FOG: TPR repeat.
       0.498
spt
[HE] COG1932 Phosphoserine aminotransferase.
  
 
  0.490
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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